PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000257.1_g00022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 348aa    MW: 38279.8 Da    PI: 4.1769
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000257.1_g00022.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.91.3e-086102288
                      NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiy.kvePwdLpkkvkaeekewyfFskrdkkya..tgkrknra..... 77 
                              p G+ F+P d +lv ++L + v++++   ++e  i+e d++ + ePw+L  ++  +e+  yf +k +kk +  tg r +r+     
  Itr_sc000257.1_g00022.1   6 PLGLFFQPFDYDLV-RFLFEFVTATNnsADEEGLIHEEDMFgDKEPWELI-RYGPSENMAYFLTKLKKKGKlkTGCRVERTvgkkv 89 
                              7899**********.7777777666623444456****987256*****7.66667788899998888766557889999756666 PP

                      NAM  78 ..tksgyWkatgk 88 
                                 k g W+ + k
  Itr_sc000257.1_g00022.1  90 kgKKPGNWHGQDK 102
                              6656899997665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.72E-63102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEMEIPLGLF FQPFDYDLVR FLFEFVTATN NSADEEGLIH EEDMFGDKEP WELIRYGPSE  60
NMAYFLTKLK KKGKLKTGCR VERTVGKKVK GKKPGNWHGQ DKVADERVLP AGDYSEESLA  120
RAKYPIVEER KDFVLCRLER KKDEEDEDED DEKTTTLEQG GKDLEVETTS PIITPSPVET  180
LTVADDDINS NLIGEETLAL TKDDMNSFLA SLAATGDTDG GHDHNISSYF DGVPVPVPVG  240
DTDISSYLDG VPVPVPVGDT DIISSYLDGV RVPVPARDTD IISSYLDGVR VPVPVPAGDT  300
DIISSYLDGV PVPVPVPAGD TDMKAQRAKS PPLRLESTPP MWSATECH